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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9501456_9502761_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9501456 - 9502761

Intron Length:
1306

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGAGGG

5'SS Class:
major

3'SS Sequence:
GTTTTCTTCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATCTGAT

U12 Branch Point Sequence:
TTGATCTGATAT

Flanking Amino Acid:
ALKMAEESERRAKEADQLKQ

Intron Amino Acid Position:
347

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.4
0.55
1.3
60.8
44.4

Major BPS
82.5
0.81
0.8
71.4
36.6

Major PPT
85.3
0.79
0.8
80.7
31.3

Minor 5ss
25.2
-2.8
3
30.3
42.8

Minor BPS
47.1
-0.1
1.8
66.64
43.6

Associated Gene:

Gene:
NF2

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9487080 - 9515859
28780

9487080 - 9515859
28780