Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9507300_9508676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9507300 - 9508676

Intron Length:

1377

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAGGTGGC

5'SS Class:

major

3'SS Sequence:

TTGTGTGCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

CAGCACTGACCC

Flanking Amino Acid:

KRLSMEIEKEKVEYMEKSKH

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

67.1

38.1

Major BPS

61.3

0.28

52.7

34.2

Major PPT

65.2

0.34

1.1

58.2

47.3

Minor 5ss

33.4

-1.9

3.5

42.8

Minor BPS

42.5

-0.5

1.8

47.02

41.6

Associated Gene:

Gene:

NF2

Ensembl Gene ID:

ENSAPLG00000006504

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035755

9487080 - 9515859

28780

ENSAPLT00000006834

9487080 - 9515859

28780