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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9538215_9539379_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9538215 - 9539379

Intron Length:

1165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGGCCG

5'SS Class:

major

3'SS Sequence:

TGTTTTTATACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTGTTTTTATAC

Flanking Amino Acid:

DAIFEHLNEGKLWKHIKHKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

57.9

46.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.1

0.79

0.9

80.6

36.1

Minor 5ss

30.6

-2.2

3.2

31.8

42.1

Minor BPS

55.2

0.14

1.7

66.59

39.5

Associated Gene:

Gene:

UQCR10

Ensembl Gene ID:

ENSAPLG00000031204

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026290

9538074 - 9539427

1354