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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9543649_9545268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9543649 - 9545268

Intron Length:

1620

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TGTGTCTTAATT

Flanking Amino Acid:

ADSDDELISRRPFTTPQVLR

Intron Amino Acid Position:

685

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

79.9

0.67

0.8

77.3

35.6

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

73.7

0.82

1.3

83.97

37.3

Associated Gene:

Gene:

ASCC2

Ensembl Gene ID:

ENSAPLG00000007242

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018138

9541570 - 9565959

24390

ENSAPLT00000007577

9541570 - 9565959

24390