Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9584266_9605203_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9584266 - 9605203

Intron Length:

20938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTAAAGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

93.4

0.98

0.7

89.1

26.3

Minor 5ss

41.5

-0.9

2.9

46.3

Minor BPS

49.2

0.02

2.1

80.94

39.6

Associated Gene:

Gene:

MTMR3

Ensembl Gene ID:

ENSAPLG00000007836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041011

9584160 - 9653411

69252

ENSAPLT00000030420

9584160 - 9653411

69252

ENSAPLT00000026072

9584160 - 9653411

69252