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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9608366_9610075_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

9608366 - 9610075

Intron Length:

1710

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCCATATG

5'SS Class:

weak_major

3'SS Sequence:

GTTTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCGTCTTCATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.6

0.13

1.3

58.9

45.6

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

93.5

0.98

0.7

92.3

26.6

Minor 5ss

33.2

-1.9

39.4

41.1

Minor BPS

52.4

0.06

1.9

64.76

Associated Gene:

Gene:

MTMR3

Ensembl Gene ID:

ENSAPLG00000007836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041011

9584160 - 9653411

69252

ENSAPLT00000030420

9584160 - 9653411

69252

ENSAPLT00000026072

9584160 - 9653411

69252