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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9656440_9659325_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

9656440 - 9659325

Intron Length:

2886

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGCTTTCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTAAAT

U12 Branch Point Sequence:

GGAGCCTAAATC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

1.1

72.4

39.5

Major BPS

57.4

0.18

1.1

64.9

37.3

Major PPT

74.2

0.55

33.2

Minor 5ss

37.6

-1.4

3.2

49.9

46.3

Minor BPS

49.7

-0

1.8

56.59

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019284

9656119 - 9675856

19738

ENSAPLT00000008853

9656119 - 9673172

17054