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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9659460_9659756_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9659460 - 9659756

Intron Length:

297

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

GCTCAGGTAACT

Flanking Amino Acid:

ASAEDISAARRWCNQELCPV

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

71.4

0.53

1.1

63.4

Major PPT

79.4

0.66

0.9

77.5

36.2

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

41.4

-0.5

2.6

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008853

9656119 - 9673172

17054

ENSAPLT00000044636

9657321 - 9675856

18536

ENSAPLT00000022945

9659326 - 9675856

16531

ENSAPLT00000019284

9656119 - 9675856

19738