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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9659824_9660070_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9659824 - 9660070

Intron Length:

247

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTGGGA

5'SS Class:

major

3'SS Sequence:

CGTTTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GATCACTTACAT

Flanking Amino Acid:

FSYSLARIYAGALLIEHASR

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.3

0.43

1.1

56.8

42.4

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

81.1

0.7

0.8

75.9

32.8

Minor 5ss

27.3

-2.6

3.6

38.1

46.8

Minor BPS

48.1

-0

1.9

66.42

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019284

9656119 - 9675856

19738

ENSAPLT00000008853

9656119 - 9673172

17054

ENSAPLT00000044636

9657321 - 9675856

18536

ENSAPLT00000022945

9659326 - 9675856

16531