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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9665996_9666697_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9665996 - 9666697

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGAGC

5'SS Class:

strong_major

3'SS Sequence:

CTGCATTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

ATTATATCAACT

Flanking Amino Acid:

PVAKLYTGKQASATVIEAME

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.5

41.1

Major BPS

75.9

0.64

66.1

40.5

Major PPT

78.6

0.64

0.9

72.5

37.3

Minor 5ss

38.7

-1.3

3.1

51.6

45.2

Minor BPS

54.3

0.21

1.8

76.79

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022945

9659326 - 9675856

16531

ENSAPLT00000019284

9656119 - 9675856

19738

ENSAPLT00000008853

9656119 - 9673172

17054

ENSAPLT00000044636

9657321 - 9675856

18536