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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9672513_9672977_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9672513 - 9672977

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGGAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTAAA

U12 Branch Point Sequence:

TGTTGCTTCACA

Flanking Amino Acid:

GLSYPSFSDLVLEEVSQDLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

0.12

1.2

57.8

37.4

Major PPT

78.7

0.64

0.9

72.3

37.9

Minor 5ss

34.1

-1.8

3.3

45.5

44.6

Minor BPS

59.4

0.29

2.2

75.93

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008507

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008853

9656119 - 9673172

17054