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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9691997_9700824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9691997 - 9700824

Intron Length:

8828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGGTTCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TGGTTCTTACAG

Flanking Amino Acid:

RMPSSRASQQISCLNLAFSQ

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

76.6

0.6

69.3

41.3

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

50.5

-0.1

1.8

56.74

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008772

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009122

9686090 - 9700960

14871