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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9722941_9724532_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9722941 - 9724532

Intron Length:

1592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATATTTA

5'SS Class:

major

3'SS Sequence:

TCTTACAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTCTTACAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

36.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

68.8

0.42

62.5

37.3

Minor 5ss

48.8

-0.1

2.6

57.6

47.1

Minor BPS

50.5

0.01

1.8

69.77

36.1

Associated Gene:

Gene:

LIF

Ensembl Gene ID:

ENSAPLG00000017145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033073

9718371 - 9724817

6447