Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9729468_9729600_R

Intron Information:

Intron Rank:

144608

Intron Class:

major

Intron Phase:

Intron Coordinates:

9729468 - 9729600

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

TTCCCACGGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

CCCCGCTGACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.3

69.3

35.8

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

0.27

1.1

58.1

37.4

Minor 5ss

29.9

-2.3

3.1

35.2

33.9

Minor BPS

40.4

-0.7

43.78

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035911

9728043 - 9730969

2927

ENSAPLT00000020358

9728043 - 9730969

2927