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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9729729_9730615_R

Intron Information:

Intron Rank:

144609

Intron Class:

major

Intron Phase:

Intron Coordinates:

9729729 - 9730615

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

TCTTCCTCCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTCCAC

U12 Branch Point Sequence:

TCTCCACCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

54.8

0.12

1.3

66.4

39.9

Major PPT

80.9

0.7

73.2

31.7

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

41.5

-0.5

2.2

64.08

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020358

9728043 - 9730969

2927