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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9738822_9739559_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9738822 - 9739559

Intron Length:

738

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CATCCCGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

TTTCCCCCATCC

Flanking Amino Acid:

PRPPPMIVPTAFVPAPPVAP

Intron Amino Acid Position:

596

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

1.2

81.4

32.7

Major BPS

48.9

-0

1.3

39.1

Major PPT

73.5

0.53

0.9

69.1

36.6

Minor 5ss

31.4

-2.1

2.5

36.7

40.4

Minor BPS

48.2

-0.1

2.1

69.45

41.4

Associated Gene:

Gene:

SF3A1

Ensembl Gene ID:

ENSAPLG00000009057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009468

9735797 - 9747273

11477