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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9740992_9741370_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9740992 - 9741370

Intron Length:

379

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCTCG

5'SS Class:

major

3'SS Sequence:

TTTTTGCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTACCTGAAGT

Flanking Amino Acid:

KQSDDEVYAPGLDIESSLKQ

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

63.3

43.9

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

82.8

0.74

0.8

78.3

30.6

Minor 5ss

39.6

-1.2

2.8

48.5

47.2

Minor BPS

59.2

0.37

1.9

77.64

44.4

Associated Gene:

Gene:

SF3A1

Ensembl Gene ID:

ENSAPLG00000009057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009468

9735797 - 9747273

11477