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Intron Name: Anas_platyrhynchos_platyrhynchos_16_9779540_9779922_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

9779540 - 9779922

Intron Length:

383

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCTCT

5'SS Class:

weak_minor

3'SS Sequence:

GCTGTTTTGCTAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TGCTGAA

U12 Branch Point Sequence:

AGCTGCTGAATG

Flanking Amino Acid:

KYDSDMAEKQAEYEEVHAAY

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

41.7

Major BPS

0.42

1.1

57.3

41.7

Major PPT

67.4

0.39

61.5

44.5

Minor 5ss

78.4

0.96

1.6

83.4

35.2

Minor BPS

47.6

-0.3

1.9

51.24

43.3

Associated Gene:

Gene:

IQCD

Ensembl Gene ID:

ENSAPLG00000015362

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016001

9775854 - 9781213

5360