Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9844576_9845491_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9844576 - 9845491

Intron Length:

916

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCCAG

5'SS Class:

major

3'SS Sequence:

TTTGTGCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

GCATCTCAAACC

Flanking Amino Acid:

GSAGSTGTAKGSVQSSKGEA

Intron Amino Acid Position:

345

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

55.8

44.9

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

75.8

0.58

0.9

69.2

37.1

Minor 5ss

31.3

-2.1

30.2

42.9

Minor BPS

46.9

-0.2

56.36

42.1

Associated Gene:

Gene:

OSBP2

Ensembl Gene ID:

ENSAPLG00000015471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025461

9783621 - 9853923

70303

ENSAPLT00000016145

9783621 - 9853793

70173