Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_9852666_9853318_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9852666 - 9853318

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GTCCTCACTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TGGTCCTCACTG

Flanking Amino Acid:

PKVLWKKYPLPENAENMYFF

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

57.1

42.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

73.4

0.53

0.9

66.5

34.2

Minor 5ss

31.9

-2.1

2.9

41.7

37.6

Minor BPS

49.2

-0.2

1.9

56.18

45.4

Associated Gene:

Gene:

OSBP2

Ensembl Gene ID:

ENSAPLG00000015471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025461

9783621 - 9853923

70303

ENSAPLT00000016145

9783621 - 9853793

70173