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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10008147_10008912_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10008147 - 10008912

Intron Length:

766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGCGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTCTCCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

CGTGCAGTAATA

Flanking Amino Acid:

MPRRRAENQDKGSPSQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.28

1.1

57.1

42.4

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

81.5

0.71

0.7

74.1

Minor 5ss

30.8

-2.2

2.9

32.5

Minor BPS

44.5

-0.4

2.3

56.67

Associated Gene:

Gene:

CRB2

Ensembl Gene ID:

ENSAPLG00000006162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042630

10008127 - 10071453

63327

ENSAPLT00000039764

10008127 - 10071225

63099