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Intron Name: Anas_platyrhynchos_platyrhynchos_18_100242_111771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

100242 - 111771

Intron Length:

11530

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCGTC

5'SS Class:

major

3'SS Sequence:

GTGTCATCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TTTGTGTCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

Major BPS

72.5

0.56

1.2

39.9

Major PPT

73.7

0.53

0.9

66.6

39.6

Minor 5ss

35.9

-1.6

3.5

50.6

46.1

Minor BPS

44.4

-0.3

2.4

71.23

45.9

Associated Gene:

Gene:

ABCA2

Ensembl Gene ID:

ENSAPLG00000002548

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036122

70053 - 112105

42053

ENSAPLT00000025674

72667 - 112105

39439

ENSAPLT00000017929

72667 - 112105

39439

ENSAPLT00000002789

72667 - 112105

39439