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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10297179_10298126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10297179 - 10298126

Intron Length:

948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGCCAC

5'SS Class:

major

3'SS Sequence:

GTTCTCCCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

CTCTCGCTAACG

Flanking Amino Acid:

LGRSGQQRSARACRPSAVTA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.3

55.9

43.4

Major BPS

57.1

0.18

1.1

Major PPT

72.4

0.51

0.9

67.5

33.8

Minor 5ss

39.7

-1.2

2.9

50.5

46.1

Minor BPS

47.7

-0.3

2.4

59.61

47.9

Associated Gene:

Gene:

LHX2

Ensembl Gene ID:

ENSAPLG00000005909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041296

10296771 - 10313461

16691