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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10298331_10298747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10298331 - 10298747

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCCC

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGCCCCTCACCG

Flanking Amino Acid:

GSIYCKEDYYRRFSVQRCAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.1

55.4

40.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

85.6

0.8

80.6

Minor 5ss

30.3

-2.3

3.5

42.7

44.4

Minor BPS

44.8

-0.5

1.9

45.65

46.4

Associated Gene:

Gene:

LHX2

Ensembl Gene ID:

ENSAPLG00000005909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006127

10284803 - 10313461

28659

ENSAPLT00000041296

10296771 - 10313461

16691