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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10435001_10441632_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10435001 - 10441632

Intron Length:

6632

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TTGAATTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTCTTTTGAATT

Flanking Amino Acid:

PGQDYQHDTQRHLTSYPYRC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.9

67.1

44.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

0.29

1.1

58.3

45.9

Minor 5ss

35.7

-1.6

3.3

46.8

48.5

Minor BPS

66.2

0.59

1.4

79.72

Associated Gene:

Gene:

NEK6

Ensembl Gene ID:

ENSAPLG00000005036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005238

10434908 - 10470831

35924