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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10488647_10496836_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10488647 - 10496836

Intron Length:

8190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTTACCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

ATTTTGTTACCA

Flanking Amino Acid:

STDKLPYVTMGSGSLAAMAI

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

81.9

0.79

0.9

80.1

Major PPT

0.56

0.8

70.3

35.1

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

53.2

0.1

2.3

72.86

39.5

Associated Gene:

Gene:

PSMB7

Ensembl Gene ID:

ENSAPLG00000004904

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005065

10472900 - 10500314

27415