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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10496953_10498216_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
10496953 - 10498216

Intron Length:
1264

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACCAAA

5'SS Class:
major

3'SS Sequence:
ACATTGTCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTATCAT

U12 Branch Point Sequence:
TCACATATAAAC

Flanking Amino Acid:
ANRMLKQMLFRYQGYIGAAL

Intron Amino Acid Position:
132

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1.2
74.1
38.3

Major BPS
88.2
0.95
0.9
88.3
28.5

Major PPT
63.5
0.3
0.9
54.8
40.6

Minor 5ss
44.2
-0.6
2.7
57.2
47.1

Minor BPS
44.1
-0.4
1.8
52.19
38.2

Associated Gene:

Gene:
PSMB7

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

10472900 - 10500314
27415