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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10554621_10557833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10554621 - 10557833

Intron Length:

3213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAACG

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAC

U12 Branch Point Sequence:

TTCACTGCAGCC

Flanking Amino Acid:

MRLEAVRADRMRGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

62.6

Major BPS

57.1

0.18

1.3

63.1

44.5

Major PPT

71.8

0.49

0.8

64.6

Minor 5ss

32.1

-2

3.1

41.2

44.9

Minor BPS

41.2

-0.6

2.2

54.9

43.5

Associated Gene:

Gene:

NR5A1

Ensembl Gene ID:

ENSAPLG00000018502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046679

10541385 - 10558159

16775