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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10573292_10580183_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10573292 - 10580183

Intron Length:

6892

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TATGCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTACTC

Flanking Amino Acid:

CMKAINFLNQDIRGLTNASQ

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

79.3

31.1

Major BPS

100

1.24

0.5

100

Major PPT

81.2

0.7

0.9

77.7

36.3

Minor 5ss

28.1

-2.5

2.7

31.6

42.6

Minor BPS

64.7

0.44

1.9

79.43

Associated Gene:

Gene:

NR6A1

Ensembl Gene ID:

ENSAPLG00000026220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017494

10572062 - 10597109

25048

ENSAPLT00000034448

10572062 - 10638238

66177