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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10585551_10586198_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10585551 - 10586198

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ACTGTGCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCATATTAACT

Flanking Amino Acid:

PLGTPMLIEDGYKVTQAELF

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.76

72.2

39.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

70.6

0.46

62.4

39.2

Minor 5ss

30.4

-2.2

3.2

31.9

42.5

Minor BPS

65.3

0.56

1.6

81.54

39.8

Associated Gene:

Gene:

NR6A1

Ensembl Gene ID:

ENSAPLG00000026220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034448

10572062 - 10638238

66177

ENSAPLT00000017494

10572062 - 10597109

25048