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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10586424_10587363_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10586424 - 10587363

Intron Length:

940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGAATT

5'SS Class:

strong_major

3'SS Sequence:

CCCTGTCTAGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

GTATATTAAAAT

Flanking Amino Acid:

QPSPVSTPSSRSVELNGFAA

Intron Amino Acid Position:

158

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

80.6

33.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

66.1

0.36

0.9

33.4

Minor 5ss

32.6

-2

3.4

47.7

Minor BPS

48.5

-0

1.9

67.97

42.3

Associated Gene:

Gene:

NR6A1

Ensembl Gene ID:

ENSAPLG00000026220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034448

10572062 - 10638238

66177

ENSAPLT00000017494

10572062 - 10597109

25048