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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10589318_10591265_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10589318 - 10591265

Intron Length:

1948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

TGTTCCTTACCA

Flanking Amino Acid:

KCLQMGMNRKAIREDGMPGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

68.9

0.47

59.6

38.6

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

76.7

0.83

1.6

84.27

35.8

Associated Gene:

Gene:

NR6A1

Ensembl Gene ID:

ENSAPLG00000026220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034448

10572062 - 10638238

66177

ENSAPLT00000017494

10572062 - 10597109

25048