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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10591497_10633969_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10591497 - 10633969

Intron Length:

42473

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

CCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GGTTGTTGATCT

Flanking Amino Acid:

SPVLPVNSMGNDRVEQRTCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

72.9

36.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.6

0.8

0.7

80.2

25.1

Minor 5ss

39.2

-1.2

2.7

37.4

Minor BPS

46.2

-0.2

2.1

66.28

44.2

Associated Gene:

Gene:

NR6A1

Ensembl Gene ID:

ENSAPLG00000026220

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034448

10572062 - 10638238

66177