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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10674845_10675686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10674845 - 10675686

Intron Length:

842

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAGAG

5'SS Class:

major

3'SS Sequence:

ACTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

AACCATTTAACT

Flanking Amino Acid:

ALIIGNCNNQVKFSELTIDM

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.2

40.1

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

89.1

0.88

0.7

84.5

29.6

Minor 5ss

35.3

-1.7

3.4

46.6

48.7

Minor BPS

58.8

0.36

1.5

70.19

40.3

Associated Gene:

Gene:

SCAI

Ensembl Gene ID:

ENSAPLG00000003982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004121

10662969 - 10687422

24454