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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10679984_10684260_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10679984 - 10684260

Intron Length:

4277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTATCTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

AAATTCTTATCT

Flanking Amino Acid:

VDSSNSVAYKNFTNLFGQPL

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.72

0.9

76.2

37.6

Minor 5ss

35.3

-1.7

3.4

50.1

46.5

Minor BPS

64.5

0.53

1.6

76.35

39.8

Associated Gene:

Gene:

SCAI

Ensembl Gene ID:

ENSAPLG00000003982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004121

10662969 - 10687422

24454