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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10712659_10713019_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10712659 - 10713019

Intron Length:

361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTTTCCTTCCCT

Flanking Amino Acid:

PRLAASPDTKEQAQGTMLKV

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

0.72

38.9

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

49.9

0.08

3.7

91.67

38.1

Associated Gene:

Gene:

PPP6C

Ensembl Gene ID:

ENSAPLG00000031249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025991

10712601 - 10716830

4230

ENSAPLT00000024430

10711296 - 10716882

5587