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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10713891_10714695_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10713891 - 10714695

Intron Length:

805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GAGCGCTCAGGT

Flanking Amino Acid:

WLFGAKVTNEFVHINNLKLI

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

38.2

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

82.9

0.74

0.7

77.9

23.9

Minor 5ss

27.4

-2.6

3.5

36.8

47.7

Minor BPS

36.8

-0.9

2.1

47.79

44.2

Associated Gene:

Gene:

PPP6C

Ensembl Gene ID:

ENSAPLG00000031249

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025991

10712601 - 10716830

4230

ENSAPLT00000024430

10711296 - 10716882

5587

ENSAPLT00000018935

10713167 - 10717291

4125