Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_10717259_10717346_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10717259 - 10717346

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGCC

5'SS Class:

major

3'SS Sequence:

GCGGTGCCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GGGGCCCTCACG

Flanking Amino Acid:

AFADAHVLELGSLRWAQAGW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

60.2

39.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

58.7

0.2

50.2

39.3

Minor 5ss

31.7

-2.1

3.2

41.8

Minor BPS

42.8

-0.7

2.2

45.44

46.4

Associated Gene:

Gene:

RABEPK

Ensembl Gene ID:

ENSAPLG00000003608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003681

10716986 - 10719369

2384