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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10723904_10724039_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10723904 - 10724039

Intron Length:

136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

GCTTCTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTGAC

U12 Branch Point Sequence:

TGCCGCCTGACG

Flanking Amino Acid:

VGIDLGTTYSCVGVFKNGRV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

43.1

Major BPS

51.1

0.03

1.2

39.9

Major PPT

75.4

0.57

0.8

69.4

31.2

Minor 5ss

25.7

-2.8

3.1

28.3

38.6

Minor BPS

43.7

-0.6

2.1

49.82

43.9

Associated Gene:

Gene:

HSPA5

Ensembl Gene ID:

ENSAPLG00000003208

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003304

10720251 - 10724179

3929