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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10729877_10730281_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

10729877 - 10730281

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACTTGG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTAAAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

TTTTCTTTAAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

65.8

42.7

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

84.5

0.78

0.9

86.4

25.2

Minor 5ss

39.7

-1.2

2.8

49.7

46.6

Minor BPS

78.4

0.75

1.3

80.63

34.8

Associated Gene:

Gene:

GAPVD1

Ensembl Gene ID:

ENSAPLG00000003016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003101

10728840 - 10740902

12063

ENSAPLT00000039297

10729692 - 10734033

4342