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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10733901_10736329_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10733901 - 10736329

Intron Length:

2429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGACA

5'SS Class:

strong_major

3'SS Sequence:

AACACTTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTTCAAAACA

Flanking Amino Acid:

PANKKNRLPIATRSRSRSNI

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

81.4

32.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

65.2

0.34

0.9

62.1

38.8

Minor 5ss

32.5

-2

3.1

40.7

45.3

Minor BPS

56.5

0.2

1.9

73.15

38.5

Associated Gene:

Gene:

GAPVD1

Ensembl Gene ID:

ENSAPLG00000003016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003101

10728840 - 10740902

12063