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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10738500_10739211_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10738500 - 10739211

Intron Length:

712

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTATATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTTTATAT

Flanking Amino Acid:

EALQLLEHEQATTQDNLDDK

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.8

81.3

28.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.1

0.7

0.9

77.5

35.6

Minor 5ss

21.3

-3.3

42.6

Minor BPS

59.3

0.37

1.7

77.45

Associated Gene:

Gene:

GAPVD1

Ensembl Gene ID:

ENSAPLG00000003016

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003101

10728840 - 10740902

12063