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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10960518_10964886_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10960518 - 10964886

Intron Length:

4369

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCATATGGG

5'SS Class:

major

3'SS Sequence:

GGAGGATGGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGAGGAT

U12 Branch Point Sequence:

GGTGCCGCAGGG

Flanking Amino Acid:

MGMRTGRGMAGPTLQGCR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.5

0.27

1.4

57.8

43.8

Major BPS

40.8

-0.5

1.5

31.2

43.9

Major PPT

46.8

-0.1

1.2

31.8

45.5

Minor 5ss

29.6

-2.3

4.2

43.1

44.9

Minor BPS

33.5

-1.3

2.3

36.89

44.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002798

10960492 - 10984156

23665