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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10965245_10970053_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10965245 - 10970053

Intron Length:

4809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGACAT

5'SS Class:

major

3'SS Sequence:

CCTTCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

AATTTCTAAACT

Flanking Amino Acid:

YHTELEKYEQACNEFTTHVM

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.3

71.6

40.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

85.5

0.8

0.7

25.3

Minor 5ss

-2.4

39.3

45.9

Minor BPS

69.4

0.69

1.6

83.19

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004193

10964879 - 10984156

19278

ENSAPLT00000002798

10960492 - 10984156

23665