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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10970245_10972182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10970245 - 10972182

Intron Length:

1938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTGGAA

U12 Branch Point Sequence:

ACGTCTGGAACA

Flanking Amino Acid:

MILRSRFLDARRKRRNFSKQ

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

49.8

-0

1.4

51.3

44.2

Major PPT

0.83

0.7

84.7

30.2

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

47.1

-0.2

2.1

57.97

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004193

10964879 - 10984156

19278

ENSAPLT00000002798

10960492 - 10984156

23665