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Intron Name: Anas_platyrhynchos_platyrhynchos_18_10981166_10984063_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

10981166 - 10984063

Intron Length:

2898

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

ATCACTTGAATT

Flanking Amino Acid:

NSLYSPHNLNANGGWQDATT

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

31.3

Major BPS

65.8

0.39

57.3

39.4

Major PPT

90.4

0.91

0.6

88.5

20.9

Minor 5ss

-1.8

2.7

42.8

36.9

Minor BPS

58.8

0.35

1.5

71.79

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004193

10964879 - 10984156

19278

ENSAPLT00000002798

10960492 - 10984156

23665