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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11167150_11170331_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

11167150 - 11170331

Intron Length:

3182

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTAGA

5'SS Class:

major

3'SS Sequence:

CTTCTGTATTGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TCTTCTGTATTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.4

39.4

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

0.16

1.7

69.3

40.9

Minor 5ss

32.6

-2

2.8

43.2

43.8

Minor BPS

50.2

0.08

2.2

74.81

43.2

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030934

11167010 - 11238859

71850

ENSAPLT00000029122

11167010 - 11214925

47916