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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11170493_11171709_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11170493 - 11171709

Intron Length:

1217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACAG

5'SS Class:

major

3'SS Sequence:

TGCTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAGAA

U12 Branch Point Sequence:

TGTCTCTTGACA

Flanking Amino Acid:

TCASKQLCHQLVLCTSSVLW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

62.5

43.8

Major BPS

0.5

39.8

Major PPT

80.3

0.68

0.9

76.9

37.4

Minor 5ss

29.9

-2.3

3.3

37.9

Minor BPS

71.6

0.67

1.2

76.56

33.6

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030934

11167010 - 11238859

71850

ENSAPLT00000029122

11167010 - 11214925

47916