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Intron Name: Anas_platyrhynchos_platyrhynchos_18_11171923_11181905_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

11171923 - 11181905

Intron Length:

9983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTCAA

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

AGCCCTTTAATG

Flanking Amino Acid:

AWPAAVMCTKDQSMMPEVRD

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

75.9

35.2

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

58.9

0.14

1.4

55.72

Associated Gene:

Gene:

MVB12B

Ensembl Gene ID:

ENSAPLG00000002612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029122

11167010 - 11214925

47916

ENSAPLT00000030934

11167010 - 11238859

71850