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Intron Name: Anas_platyrhynchos_platyrhynchos_18_1117544_1118697_R

Intron Information:

Intron Rank:

146494

Intron Class:

major

Intron Phase:

Intron Coordinates:

1117544 - 1118697

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATAAG

5'SS Class:

major

3'SS Sequence:

ATTTTTTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTATTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

71.4

40.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

84.1

0.77

0.9

85.1

34.9

Minor 5ss

33.4

-1.9

41.6

Minor BPS

71.7

0.76

1.1

82.37

32.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026177

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042101

1099890 - 1118812

18923

ENSAPLT00000027210

1100948 - 1118812

17865